STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr1384ABC transporter ATP-binding protein; ORF_ID:alr1384; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
alr1383
Permease protein of iron(III) ABC transporter; ORF_ID:alr1383.
 
 0.983
alr1382
Ferric iron-binding periplasmic protein of ABC transporter; ORF_ID:alr1382.
 
 
 0.972
all5042
Permease protein of polyamine ABC transporter; ORF_ID:all5042.
 
 0.948
alr1334
Permease protein of ABC transporter; ORF_ID:alr1334.
 
  
 0.939
all5043
Polyamine-binding protein of polyamine ABC transporter; ORF_ID:all5043.
  
 0.868
all2011
Permease protein of ABC transporter; ORF_ID:all2011.
 
    0.863
alr0299
Periplasmic polyamine-binding protein of ABC transporter; ORF_ID:alr0299.
 
  
 0.847
alr1500
Transport permease protein; ORF_ID:alr1500; hypothetical protein.
 
      0.824
alr1491
ORF_ID:alr1491; probable ABC transporter permease.
 
      0.817
all5003
Permease protein of peptide ABC transporter; ORF_ID:all5003.
 
    0.808
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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