STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asl1434ORF_ID:asl1434; hypothetical protein; Belongs to the UPF0437 family. (71 aa)    
Predicted Functional Partners:
nifW
Nitrogen fixation protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.962
all1435
ORF_ID:all1435; hypothetical protein.
 
  
 0.910
nifX
Nitrogen fixation protein; ORF_ID:all1436; nifX gene product.
 
  
 0.898
asr1405
ORF_ID:asr1405; hypothetical protein.
      
 0.884
asr2523
ORF_ID:asr2523; unknown protein.
      
 0.884
nifN
Nitrogenase olybdenum-iron protein; This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor); Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.846
patB
Transcriptional regulator; ORF_ID:all2512; patB gene product.
 
   
 0.828
hesA
HesA protein; May be required for efficient nitrogen fixation.
     
 0.807
nifT
NifT protein; ORF_ID:asr1409.
 
  
 0.790
all2531
ORF_ID:all2531; nitrogen fixation protein NifX homolog.
 
  
 0.789
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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