STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr1554ABC transporter ATP-binding protein; ORF_ID:alr1554. (608 aa)    
Predicted Functional Partners:
asr1156
ORF_ID:asr1156; hypothetical protein.
      
 0.655
rpaA
Two-component response regulator; ORF_ID:all0129; rpaA gene product.
      
 0.609
ilvG
Acetohydroxy acid synthase; ORF_ID:all4613; ilvG gene product.
    
 
 0.605
alr1377
ORF_ID:alr1377; unknown protein.
  
     0.595
rca
Ribulose 1,5-bisphosphate carboxylase/oxygenase activase; Activation of RuBisCO (ribulose-1,5-bisohosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure.
      
 0.545
alr3514
ORF_ID:alr3514; hypothetical protein.
  
     0.524
alr2679
Polyketide synthase; ORF_ID:alr2679.
 
 0.502
all0089
ORF_ID:all0089; hypothetical protein.
      
 0.499
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions; Belongs to the PPase family.
   
 
 0.492
alr2811
Valine-pyruvate aminotransferase; ORF_ID:alr2811.
      
 0.478
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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