Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| all0980 | alr1600 | gene:10492994 | gene:10493616 | D-alanyl-D-alanine ligase; Cell wall formation. | ORF_ID:alr1600; similar to aluminum resistance protein. | 0.716 |
| all4374 | alr1158 | gene:10496423 | gene:10493172 | ORF_ID:all4374; probable fibronectin/fibrinogen-binding protein. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.558 |
| all4374 | alr1600 | gene:10496423 | gene:10493616 | ORF_ID:all4374; probable fibronectin/fibrinogen-binding protein. | ORF_ID:alr1600; similar to aluminum resistance protein. | 0.456 |
| all4374 | alr2890 | gene:10496423 | gene:10494924 | ORF_ID:all4374; probable fibronectin/fibrinogen-binding protein. | ORF_ID:alr2890; hypothetical protein. | 0.582 |
| all4887 | alr0487 | gene:10496941 | gene:10492496 | Lysine decarboxylase; ORF_ID:all4887. | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.420 |
| all4887 | alr1158 | gene:10496941 | gene:10493172 | Lysine decarboxylase; ORF_ID:all4887. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.468 |
| all4887 | alr1600 | gene:10496941 | gene:10493616 | Lysine decarboxylase; ORF_ID:all4887. | ORF_ID:alr1600; similar to aluminum resistance protein. | 0.785 |
| alr0487 | all4887 | gene:10492496 | gene:10496941 | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Lysine decarboxylase; ORF_ID:all4887. | 0.420 |
| alr0487 | alr1158 | gene:10492496 | gene:10493172 | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.520 |
| alr0487 | alr1600 | gene:10492496 | gene:10493616 | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | ORF_ID:alr1600; similar to aluminum resistance protein. | 0.739 |
| alr0487 | alr2890 | gene:10492496 | gene:10494924 | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | ORF_ID:alr2890; hypothetical protein. | 0.818 |
| alr1158 | all4374 | gene:10493172 | gene:10496423 | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | ORF_ID:all4374; probable fibronectin/fibrinogen-binding protein. | 0.558 |
| alr1158 | all4887 | gene:10493172 | gene:10496941 | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Lysine decarboxylase; ORF_ID:all4887. | 0.468 |
| alr1158 | alr0487 | gene:10493172 | gene:10492496 | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.520 |
| alr1158 | alr1600 | gene:10493172 | gene:10493616 | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | ORF_ID:alr1600; similar to aluminum resistance protein. | 0.479 |
| alr1158 | alr2890 | gene:10493172 | gene:10494924 | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | ORF_ID:alr2890; hypothetical protein. | 0.724 |
| alr1600 | all0980 | gene:10493616 | gene:10492994 | ORF_ID:alr1600; similar to aluminum resistance protein. | D-alanyl-D-alanine ligase; Cell wall formation. | 0.716 |
| alr1600 | all4374 | gene:10493616 | gene:10496423 | ORF_ID:alr1600; similar to aluminum resistance protein. | ORF_ID:all4374; probable fibronectin/fibrinogen-binding protein. | 0.456 |
| alr1600 | all4887 | gene:10493616 | gene:10496941 | ORF_ID:alr1600; similar to aluminum resistance protein. | Lysine decarboxylase; ORF_ID:all4887. | 0.785 |
| alr1600 | alr0487 | gene:10493616 | gene:10492496 | ORF_ID:alr1600; similar to aluminum resistance protein. | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.739 |
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