Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1737 | all1766 | gene:10493755 | gene:10493784 | ORF_ID:all1737; probable glycosyl transferase. | ORF_ID:all1766; probable glycosyl transferase. | 0.632 |
all1737 | all1767 | gene:10493755 | gene:10493785 | ORF_ID:all1737; probable glycosyl transferase. | ORF_ID:all1767; probable glycosyl transferase. | 0.747 |
all1737 | all4431 | gene:10493755 | gene:10496480 | ORF_ID:all1737; probable glycosyl transferase. | Glycosyl transferase; ORF_ID:all4431. | 0.648 |
all1737 | alr4487 | gene:10493755 | gene:10496536 | ORF_ID:all1737; probable glycosyl transferase. | ORF_ID:alr4487; hypothetical protein. | 0.402 |
all1737 | alr4493 | gene:10493755 | gene:10496542 | ORF_ID:all1737; probable glycosyl transferase. | ORF_ID:alr4493; probable glycosyltransferase. | 0.493 |
all1764 | all1765 | gene:10493782 | gene:10493783 | ORF_ID:all1764; hypothetical protein. | ORF_ID:all1765; hypothetical protein. | 0.671 |
all1764 | all1766 | gene:10493782 | gene:10493784 | ORF_ID:all1764; hypothetical protein. | ORF_ID:all1766; probable glycosyl transferase. | 0.618 |
all1764 | all1767 | gene:10493782 | gene:10493785 | ORF_ID:all1764; hypothetical protein. | ORF_ID:all1767; probable glycosyl transferase. | 0.618 |
all1764 | all1768 | gene:10493782 | gene:10493786 | ORF_ID:all1764; hypothetical protein. | ORF_ID:all1768; probable glycosyl transferase. | 0.573 |
all1765 | all1764 | gene:10493783 | gene:10493782 | ORF_ID:all1765; hypothetical protein. | ORF_ID:all1764; hypothetical protein. | 0.671 |
all1765 | all1766 | gene:10493783 | gene:10493784 | ORF_ID:all1765; hypothetical protein. | ORF_ID:all1766; probable glycosyl transferase. | 0.709 |
all1765 | all1767 | gene:10493783 | gene:10493785 | ORF_ID:all1765; hypothetical protein. | ORF_ID:all1767; probable glycosyl transferase. | 0.750 |
all1765 | all1768 | gene:10493783 | gene:10493786 | ORF_ID:all1765; hypothetical protein. | ORF_ID:all1768; probable glycosyl transferase. | 0.742 |
all1766 | all1737 | gene:10493784 | gene:10493755 | ORF_ID:all1766; probable glycosyl transferase. | ORF_ID:all1737; probable glycosyl transferase. | 0.632 |
all1766 | all1764 | gene:10493784 | gene:10493782 | ORF_ID:all1766; probable glycosyl transferase. | ORF_ID:all1764; hypothetical protein. | 0.618 |
all1766 | all1765 | gene:10493784 | gene:10493783 | ORF_ID:all1766; probable glycosyl transferase. | ORF_ID:all1765; hypothetical protein. | 0.709 |
all1766 | all1767 | gene:10493784 | gene:10493785 | ORF_ID:all1766; probable glycosyl transferase. | ORF_ID:all1767; probable glycosyl transferase. | 0.840 |
all1766 | all1768 | gene:10493784 | gene:10493786 | ORF_ID:all1766; probable glycosyl transferase. | ORF_ID:all1768; probable glycosyl transferase. | 0.926 |
all1766 | all4431 | gene:10493784 | gene:10496480 | ORF_ID:all1766; probable glycosyl transferase. | Glycosyl transferase; ORF_ID:all4431. | 0.775 |
all1766 | alr4487 | gene:10493784 | gene:10496536 | ORF_ID:all1766; probable glycosyl transferase. | ORF_ID:alr4487; hypothetical protein. | 0.405 |
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