STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all1780Precorrin-6x reductase; ORF_ID:all1780. (245 aa)    
Predicted Functional Partners:
all0453
Cobalamin biosynthesis precorrin-3 methylase; ORF_ID:all0453.
 
  
 0.999
all3722
Precorrin-6y-dependent methyltransferase; ORF_ID:all3722.
 
 
 0.996
all3876
Precorrin decarbocylase; ORF_ID:all3876.
 
 
 0.986
all4698
Precorrin-3 methylase; ORF_ID:all4698; Belongs to the precorrin methyltransferase family.
  
 0.984
all2847
Cobalamin biosynthesis protein D; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
 
 0.979
CobN
Cobalamin biosynthetic protein; ORF_ID:alr1689; cobN gene product.
 
   
 0.976
all0455
Cobalamin biosynthesis precorrin-2 methyltransferase; ORF_ID:all0455; Belongs to the precorrin methyltransferase family.
 
  
 0.970
all0456
Precorrin isomerase; ORF_ID:all0456.
 
  
 0.958
cobD
Cobalamin biosynthetic protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.950
alr2377
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.896
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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