Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1837 | all1838 | gene:10493856 | gene:10493857 | ORF_ID:all1837; hypothetical protein. | ORF_ID:all1838; hypothetical protein. | 0.997 |
all1837 | all1841 | gene:10493856 | gene:10493860 | ORF_ID:all1837; hypothetical protein. | ORF_ID:all1841; hypothetical protein. | 0.999 |
all1837 | all1842 | gene:10493856 | gene:10493861 | ORF_ID:all1837; hypothetical protein. | NADH dehydrogenase; ORF_ID:all1842. | 0.999 |
all1837 | all1843 | gene:10493856 | gene:10493862 | ORF_ID:all1837; hypothetical protein. | ORF_ID:all1843; hypothetical protein. | 0.999 |
all1837 | all2134 | gene:10493856 | gene:10494163 | ORF_ID:all1837; hypothetical protein. | ORF_ID:all2134; hypothetical protein. | 0.859 |
all1837 | asl1839 | gene:10493856 | gene:10493858 | ORF_ID:all1837; hypothetical protein. | ORF_ID:asl1839; hypothetical protein. | 0.998 |
all1837 | asl1840 | gene:10493856 | gene:10493859 | ORF_ID:all1837; hypothetical protein. | ORF_ID:asl1840; hypothetical protein. | 0.958 |
all1837 | ndhF | gene:10493856 | gene:10492882 | ORF_ID:all1837; hypothetical protein. | NADH dehydrogenase subunit 5; ORF_ID:alr0869. | 0.878 |
all1837 | ndhF-2 | gene:10493856 | gene:10495998 | ORF_ID:all1837; hypothetical protein. | NADH dehydrogenase subunit 5; ORF_ID:alr3956. | 0.878 |
all1837 | ndhF-3 | gene:10493856 | gene:10496204 | ORF_ID:all1837; hypothetical protein. | NADH dehydrogenase subunit 5; ORF_ID:alr4156. | 0.878 |
all1838 | all1837 | gene:10493857 | gene:10493856 | ORF_ID:all1838; hypothetical protein. | ORF_ID:all1837; hypothetical protein. | 0.997 |
all1838 | all1841 | gene:10493857 | gene:10493860 | ORF_ID:all1838; hypothetical protein. | ORF_ID:all1841; hypothetical protein. | 0.983 |
all1838 | all1842 | gene:10493857 | gene:10493861 | ORF_ID:all1838; hypothetical protein. | NADH dehydrogenase; ORF_ID:all1842. | 0.980 |
all1838 | all1843 | gene:10493857 | gene:10493862 | ORF_ID:all1838; hypothetical protein. | ORF_ID:all1843; hypothetical protein. | 0.998 |
all1838 | all2134 | gene:10493857 | gene:10494163 | ORF_ID:all1838; hypothetical protein. | ORF_ID:all2134; hypothetical protein. | 0.566 |
all1838 | asl1839 | gene:10493857 | gene:10493858 | ORF_ID:all1838; hypothetical protein. | ORF_ID:asl1839; hypothetical protein. | 0.981 |
all1838 | asl1840 | gene:10493857 | gene:10493859 | ORF_ID:all1838; hypothetical protein. | ORF_ID:asl1840; hypothetical protein. | 0.960 |
all1841 | all1837 | gene:10493860 | gene:10493856 | ORF_ID:all1841; hypothetical protein. | ORF_ID:all1837; hypothetical protein. | 0.999 |
all1841 | all1838 | gene:10493860 | gene:10493857 | ORF_ID:all1841; hypothetical protein. | ORF_ID:all1838; hypothetical protein. | 0.983 |
all1841 | all1842 | gene:10493860 | gene:10493861 | ORF_ID:all1841; hypothetical protein. | NADH dehydrogenase; ORF_ID:all1842. | 0.999 |
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