STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr2139ORF_ID:alr2139; hypothetical protein. (100 aa)    
Predicted Functional Partners:
alr2137
Two-component sensor histidine kinase; ORF_ID:alr2137.
 
    0.662
alr3431
Copper amine oxidase; ORF_ID:alr3431.
  
     0.597
all2094
Two-component hybrid sensor and regulator; ORF_ID:all2094.
  
     0.555
alr4787
ORF_ID:alr4787; hypothetical protein.
  
    0.554
all2302
Patatin-like protein; ORF_ID:all2302.
  
   
 0.546
all3045
ORF_ID:all3045; unknown protein.
  
  
 0.531
all3314
ORF_ID:all3314; unknown protein.
  
     0.485
alr0056
ORF_ID:alr0056; similar to DOPA-dioxygenase.
  
    0.463
all1723
ORF_ID:all1723; probable aldolase.
  
     0.438
all4607
Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.431
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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