STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr2190Alpha-amylase; ORF_ID:alr2190. (492 aa)    
Predicted Functional Partners:
all0875
Malto-oligosyltrehalose trehalohydrolase; ORF_ID:all0875; probable alpha-glucanotransferase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.953
all0167
Maltooligosyltrehalose synthase; ORF_ID:all0167.
  
 
 0.949
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.927
all1272
ORF_ID:all1272; probable glycogen phosphorylase.
  
 0.925
all2806
ORF_ID:all2806; probable alpha-glucan phosphorylase.
  
 0.925
alr3871
4-alpha-glucanotransferase; ORF_ID:alr3871.
  
 
 0.925
alr0169
Cyclomaltodextrin glucanotransferase; ORF_ID:alr0169.
 
   
0.916
alr1519
Amino acid transporter; ORF_ID:alr1519.
   
 0.912
alr2450
ORF_ID:alr2450; hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
     
 0.912
alr4773
Alpha-glucosidase; ORF_ID:alr4773; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.911
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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