Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0729 | all1914 | gene:10492739 | gene:10493933 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | 0.971 |
all0729 | all2343 | gene:10492739 | gene:10494372 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | ORF_ID:all2343; similar to chloroplast membrane-associated 30 kD protein. | 0.598 |
all0729 | all2379 | gene:10492739 | gene:10494409 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all2379. | 0.974 |
all0729 | all2875 | gene:10492739 | gene:10494909 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all2875. | 0.984 |
all0729 | all4097 | gene:10492739 | gene:10496145 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:all4097. | 0.983 |
all0729 | alr1499 | gene:10492739 | gene:10493513 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | ORF_ID:alr1499; unknown protein. | 0.795 |
all0729 | alr2279 | gene:10492739 | gene:10494308 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:alr2279. | 0.982 |
all0729 | alr2428 | gene:10492739 | gene:10494458 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:alr2428. | 0.989 |
all0729 | alr3761 | gene:10492739 | gene:10495803 | Two-component hybrid sensor and regulator; ORF_ID:all0729. | Two-component hybrid sensor and regulator; ORF_ID:alr3761. | 0.984 |
all1914 | all0729 | gene:10493933 | gene:10492739 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | Two-component hybrid sensor and regulator; ORF_ID:all0729. | 0.971 |
all1914 | all2343 | gene:10493933 | gene:10494372 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | ORF_ID:all2343; similar to chloroplast membrane-associated 30 kD protein. | 0.598 |
all1914 | all2379 | gene:10493933 | gene:10494409 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | Two-component hybrid sensor and regulator; ORF_ID:all2379. | 0.970 |
all1914 | all2875 | gene:10493933 | gene:10494909 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | Two-component hybrid sensor and regulator; ORF_ID:all2875. | 0.977 |
all1914 | all4097 | gene:10493933 | gene:10496145 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | Two-component hybrid sensor and regulator; ORF_ID:all4097. | 0.973 |
all1914 | alr1499 | gene:10493933 | gene:10493513 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | ORF_ID:alr1499; unknown protein. | 0.794 |
all1914 | alr2279 | gene:10493933 | gene:10494308 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | Two-component hybrid sensor and regulator; ORF_ID:alr2279. | 0.974 |
all1914 | alr2428 | gene:10493933 | gene:10494458 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | Two-component hybrid sensor and regulator; ORF_ID:alr2428. | 0.979 |
all1914 | alr3761 | gene:10493933 | gene:10495803 | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | Two-component hybrid sensor and regulator; ORF_ID:alr3761. | 0.981 |
all2343 | all0729 | gene:10494372 | gene:10492739 | ORF_ID:all2343; similar to chloroplast membrane-associated 30 kD protein. | Two-component hybrid sensor and regulator; ORF_ID:all0729. | 0.598 |
all2343 | all1914 | gene:10494372 | gene:10493933 | ORF_ID:all2343; similar to chloroplast membrane-associated 30 kD protein. | Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. | 0.598 |
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