Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all2399 | all2402 | gene:10494429 | gene:10494432 | ORF_ID:all2399; hypothetical protein. | ORF_ID:all2402; hypothetical protein. | 0.411 |
all2399 | all3779 | gene:10494429 | gene:10495821 | ORF_ID:all2399; hypothetical protein. | ORF_ID:all3779; hypothetical protein. | 0.412 |
all2399 | alr4134 | gene:10494429 | gene:10496182 | ORF_ID:all2399; hypothetical protein. | ORF_ID:alr4134; hypothetical protein. | 0.551 |
all2399 | alr4852 | gene:10494429 | gene:10496906 | ORF_ID:all2399; hypothetical protein. | ORF_ID:alr4852; hypothetical protein. | 0.461 |
all2399 | asl2400 | gene:10494429 | gene:10494430 | ORF_ID:all2399; hypothetical protein. | ORF_ID:asl2400; unknown protein. | 0.506 |
all2399 | asl2401 | gene:10494429 | gene:10494431 | ORF_ID:all2399; hypothetical protein. | ORF_ID:asl2401; hypothetical protein. | 0.411 |
all2399 | asl2403 | gene:10494429 | gene:10494433 | ORF_ID:all2399; hypothetical protein. | ORF_ID:asl2403; hypothetical protein. | 0.593 |
all2402 | all2399 | gene:10494432 | gene:10494429 | ORF_ID:all2402; hypothetical protein. | ORF_ID:all2399; hypothetical protein. | 0.411 |
all2402 | alr2404 | gene:10494432 | gene:10494434 | ORF_ID:all2402; hypothetical protein. | ORF_ID:alr2404; hypothetical protein. | 0.486 |
all2402 | asl2400 | gene:10494432 | gene:10494430 | ORF_ID:all2402; hypothetical protein. | ORF_ID:asl2400; unknown protein. | 0.610 |
all2402 | asl2401 | gene:10494432 | gene:10494431 | ORF_ID:all2402; hypothetical protein. | ORF_ID:asl2401; hypothetical protein. | 0.910 |
all2402 | asl2403 | gene:10494432 | gene:10494433 | ORF_ID:all2402; hypothetical protein. | ORF_ID:asl2403; hypothetical protein. | 0.714 |
all3779 | all2399 | gene:10495821 | gene:10494429 | ORF_ID:all3779; hypothetical protein. | ORF_ID:all2399; hypothetical protein. | 0.412 |
all3779 | asl2403 | gene:10495821 | gene:10494433 | ORF_ID:all3779; hypothetical protein. | ORF_ID:asl2403; hypothetical protein. | 0.558 |
alr1536 | alr4852 | gene:10493549 | gene:10496906 | ORF_ID:alr1536; hypothetical protein. | ORF_ID:alr4852; hypothetical protein. | 0.535 |
alr1536 | asl2403 | gene:10493549 | gene:10494433 | ORF_ID:alr1536; hypothetical protein. | ORF_ID:asl2403; hypothetical protein. | 0.537 |
alr2404 | all2402 | gene:10494434 | gene:10494432 | ORF_ID:alr2404; hypothetical protein. | ORF_ID:all2402; hypothetical protein. | 0.486 |
alr2404 | asl2401 | gene:10494434 | gene:10494431 | ORF_ID:alr2404; hypothetical protein. | ORF_ID:asl2401; hypothetical protein. | 0.486 |
alr2404 | asl2403 | gene:10494434 | gene:10494433 | ORF_ID:alr2404; hypothetical protein. | ORF_ID:asl2403; hypothetical protein. | 0.522 |
alr4134 | all2399 | gene:10496182 | gene:10494429 | ORF_ID:alr4134; hypothetical protein. | ORF_ID:all2399; hypothetical protein. | 0.551 |
page 1 of 3