Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1826 | all2413 | gene:10493844 | gene:10494443 | ORF_ID:all1826; hypothetical protein. | ORF_ID:all2413; hypothetical protein. | 0.760 |
all1826 | all3039 | gene:10493844 | gene:10495075 | ORF_ID:all1826; hypothetical protein. | ORF_ID:all3039; hypothetical protein. | 0.630 |
all1826 | all4508 | gene:10493844 | gene:10496557 | ORF_ID:all1826; hypothetical protein. | ORF_ID:all4508; hypothetical protein. | 0.772 |
all1826 | alr0045 | gene:10493844 | gene:10492049 | ORF_ID:all1826; hypothetical protein. | ORF_ID:alr0045; hypothetical protein. | 0.767 |
all1826 | alr1085 | gene:10493844 | gene:10493099 | ORF_ID:all1826; hypothetical protein. | ORF_ID:alr1085; hypothetical protein. | 0.768 |
all1826 | alr1246 | gene:10493844 | gene:10493260 | ORF_ID:all1826; hypothetical protein. | ORF_ID:alr1246; hypothetical protein. | 0.629 |
all1826 | alr2414 | gene:10493844 | gene:10494444 | ORF_ID:all1826; hypothetical protein. | ORF_ID:alr2414; hypothetical protein. | 0.575 |
all1826 | alr4674 | gene:10493844 | gene:10496726 | ORF_ID:all1826; hypothetical protein. | ORF_ID:alr4674; putative transcripton factor for heterocyst differentiation DevT. | 0.705 |
all1826 | psaE | gene:10493844 | gene:10496368 | ORF_ID:all1826; hypothetical protein. | Photosystem I protein E; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.763 |
all1826 | psbO | gene:10493844 | gene:10495896 | ORF_ID:all1826; hypothetical protein. | Manganese-stabilzing protein precursor; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | 0.754 |
all2413 | all1826 | gene:10494443 | gene:10493844 | ORF_ID:all2413; hypothetical protein. | ORF_ID:all1826; hypothetical protein. | 0.760 |
all2413 | all3039 | gene:10494443 | gene:10495075 | ORF_ID:all2413; hypothetical protein. | ORF_ID:all3039; hypothetical protein. | 0.735 |
all2413 | all4508 | gene:10494443 | gene:10496557 | ORF_ID:all2413; hypothetical protein. | ORF_ID:all4508; hypothetical protein. | 0.728 |
all2413 | alr0045 | gene:10494443 | gene:10492049 | ORF_ID:all2413; hypothetical protein. | ORF_ID:alr0045; hypothetical protein. | 0.675 |
all2413 | alr1085 | gene:10494443 | gene:10493099 | ORF_ID:all2413; hypothetical protein. | ORF_ID:alr1085; hypothetical protein. | 0.680 |
all2413 | alr1246 | gene:10494443 | gene:10493260 | ORF_ID:all2413; hypothetical protein. | ORF_ID:alr1246; hypothetical protein. | 0.684 |
all2413 | alr2414 | gene:10494443 | gene:10494444 | ORF_ID:all2413; hypothetical protein. | ORF_ID:alr2414; hypothetical protein. | 0.861 |
all2413 | alr4674 | gene:10494443 | gene:10496726 | ORF_ID:all2413; hypothetical protein. | ORF_ID:alr4674; putative transcripton factor for heterocyst differentiation DevT. | 0.684 |
all2413 | psaE | gene:10494443 | gene:10496368 | ORF_ID:all2413; hypothetical protein. | Photosystem I protein E; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.693 |
all2413 | psbO | gene:10494443 | gene:10495896 | ORF_ID:all2413; hypothetical protein. | Manganese-stabilzing protein precursor; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | 0.690 |
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