STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all2584ATP-binding protein of ferrichrome ABC transporter; ORF_ID:all2584. (289 aa)    
Predicted Functional Partners:
all2586
iron(III) dicitrate transport system permease protein; ORF_ID:all2586; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.980
all2585
iron(III) dicitrate transport system permease protein; ORF_ID:all2585; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.978
alr3240
Permease protein of ferrichrome ABC transporter; ORF_ID:alr3240; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.935
all0387
Permease protein of iron(III) ABC transporter; ORF_ID:all0387; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.933
alr4032
Permease protein of iron(III) ABC transporter; ORF_ID:alr4032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.914
all4732
ATP-binding protein of ABC transporter; ORF_ID:all4732.
 
 
   
0.864
all2147
Ferrichrome binding protein of ABC transporter; ORF_ID:all2147.
  
   0.862
alr2593
iron(III) dicitrate-binding periplasmic protein; ORF_ID:alr2593.
  
   0.862
all1100
iron(III) dicitrate-binding periplasmic protein; ORF_ID:all1100.
  
   0.861
alr2176
iron(III) dicitrate-binding protein of ABC transporter; ORF_ID:alr2176.
  
   0.861
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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