Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1648 | all1649 | gene:10493665 | gene:10493666 | ORF_ID:all1648; similar to polyketide synthase. | ORF_ID:all1649; similar to polyketide synthase. | 0.886 |
all1648 | all1695 | gene:10493665 | gene:10493713 | ORF_ID:all1648; similar to polyketide synthase. | ORF_ID:all1695; probable peptide synthetase. | 0.999 |
all1648 | all2635 | gene:10493665 | gene:10494666 | ORF_ID:all1648; similar to polyketide synthase. | Polyketide synthase type I; ORF_ID:all2635. | 0.585 |
all1648 | all2638 | gene:10493665 | gene:10494669 | ORF_ID:all1648; similar to polyketide synthase. | Glutamate-1-semialdehyde aminotransferase; ORF_ID:all2638; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.955 |
all1648 | all2649 | gene:10493665 | gene:10494680 | ORF_ID:all1648; similar to polyketide synthase. | ORF_ID:all2649; probable non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.995 |
all1648 | alr2679 | gene:10493665 | gene:10494710 | ORF_ID:all1648; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr2679. | 0.810 |
all1648 | alr2680 | gene:10493665 | gene:10494711 | ORF_ID:all1648; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr2680. | 0.798 |
all1648 | hetM | gene:10493665 | gene:10497419 | ORF_ID:all1648; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr5357; hetM gene product. | 0.969 |
all1649 | all1648 | gene:10493666 | gene:10493665 | ORF_ID:all1649; similar to polyketide synthase. | ORF_ID:all1648; similar to polyketide synthase. | 0.886 |
all1649 | all1695 | gene:10493666 | gene:10493713 | ORF_ID:all1649; similar to polyketide synthase. | ORF_ID:all1695; probable peptide synthetase. | 0.999 |
all1649 | all2635 | gene:10493666 | gene:10494666 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase type I; ORF_ID:all2635. | 0.804 |
all1649 | all2638 | gene:10493666 | gene:10494669 | ORF_ID:all1649; similar to polyketide synthase. | Glutamate-1-semialdehyde aminotransferase; ORF_ID:all2638; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.959 |
all1649 | all2646 | gene:10493666 | gene:10494677 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase type I; ORF_ID:all2646. | 0.583 |
all1649 | all2649 | gene:10493666 | gene:10494680 | ORF_ID:all1649; similar to polyketide synthase. | ORF_ID:all2649; probable non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.998 |
all1649 | alr2679 | gene:10493666 | gene:10494710 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr2679. | 0.985 |
all1649 | alr2680 | gene:10493666 | gene:10494711 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr2680. | 0.976 |
all1649 | hetM | gene:10493666 | gene:10497419 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr5357; hetM gene product. | 0.985 |
all1649 | hglE | gene:10493666 | gene:10493663 | ORF_ID:all1649; similar to polyketide synthase. | Heterocyst glycolipid synthase; ORF_ID:all1646; hglE gene product. | 0.618 |
all1695 | all1648 | gene:10493713 | gene:10493665 | ORF_ID:all1695; probable peptide synthetase. | ORF_ID:all1648; similar to polyketide synthase. | 0.999 |
all1695 | all1649 | gene:10493713 | gene:10493666 | ORF_ID:all1695; probable peptide synthetase. | ORF_ID:all1649; similar to polyketide synthase. | 0.999 |
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