STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr2722Periplasmic sugar-binding protein of sugar ABC transporter; ORF_ID:alr2722. (432 aa)    
Predicted Functional Partners:
all5282
ABC transporter sugar permease; ORF_ID:all5282.
 
 
 0.924
all4824
Permease protein of sugar ABC transporter; ORF_ID:all4824.
 
 
 0.920
all0261
Sugar transport system permease protein; ORF_ID:all0261.
 
 
 0.919
alr0789
ABC transporter sugar permease; ORF_ID:alr0789.
 
 0.919
alr0738
Permease protein of sugar ABC transporter; ORF_ID:alr0738.
 
 0.913
alr2532
Sugar ABC transport system, permease protein; ORF_ID:alr2532.
 
 0.911
all1823
Sugar ABC transportor, ATP-binding protein; ORF_ID:all1823; Belongs to the ABC transporter superfamily.
 
 0.910
alr4781
ATP-binding protein of sugar ABC transporter; ORF_ID:alr4781; Belongs to the ABC transporter superfamily.
 
 0.879
alr3994
ORF_ID:alr3994; unknown protein.
  
     0.549
all2721
ORF_ID:all2721; hypothetical protein.
       0.500
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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