Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0575 | all2736 | gene:10492586 | gene:10494769 | ORF_ID:all0575; unknown protein. | ORF_ID:all2736; hypothetical protein. | 0.400 |
all0575 | all2776 | gene:10492586 | gene:10494810 | ORF_ID:all0575; unknown protein. | ORF_ID:all2776; hypothetical protein. | 0.528 |
all0575 | alr0230 | gene:10492586 | gene:10492237 | ORF_ID:all0575; unknown protein. | ORF_ID:alr0230; unknown protein. | 0.410 |
all0575 | alr5340 | gene:10492586 | gene:10497402 | ORF_ID:all0575; unknown protein. | ORF_ID:alr5340; hypothetical protein. | 0.459 |
all1363 | all2736 | gene:10493378 | gene:10494769 | Peptidylprolyl isomerase; ORF_ID:all1363; hypothetical protein. | ORF_ID:all2736; hypothetical protein. | 0.451 |
all1363 | all2776 | gene:10493378 | gene:10494810 | Peptidylprolyl isomerase; ORF_ID:all1363; hypothetical protein. | ORF_ID:all2776; hypothetical protein. | 0.571 |
all1363 | asl2417 | gene:10493378 | gene:10494447 | Peptidylprolyl isomerase; ORF_ID:all1363; hypothetical protein. | ORF_ID:asl2417; hypothetical protein. | 0.665 |
all2677 | all2736 | gene:10494708 | gene:10494769 | ORF_ID:all2677; hypothetical protein. | ORF_ID:all2736; hypothetical protein. | 0.526 |
all2677 | all2776 | gene:10494708 | gene:10494810 | ORF_ID:all2677; hypothetical protein. | ORF_ID:all2776; hypothetical protein. | 0.615 |
all2677 | asl2417 | gene:10494708 | gene:10494447 | ORF_ID:all2677; hypothetical protein. | ORF_ID:asl2417; hypothetical protein. | 0.658 |
all2736 | all0575 | gene:10494769 | gene:10492586 | ORF_ID:all2736; hypothetical protein. | ORF_ID:all0575; unknown protein. | 0.400 |
all2736 | all1363 | gene:10494769 | gene:10493378 | ORF_ID:all2736; hypothetical protein. | Peptidylprolyl isomerase; ORF_ID:all1363; hypothetical protein. | 0.451 |
all2736 | all2677 | gene:10494769 | gene:10494708 | ORF_ID:all2736; hypothetical protein. | ORF_ID:all2677; hypothetical protein. | 0.526 |
all2736 | all2776 | gene:10494769 | gene:10494810 | ORF_ID:all2736; hypothetical protein. | ORF_ID:all2776; hypothetical protein. | 0.745 |
all2736 | alr1112 | gene:10494769 | gene:10493126 | ORF_ID:all2736; hypothetical protein. | ORF_ID:alr1112; probable transglycosylase. | 0.639 |
all2736 | alr3690 | gene:10494769 | gene:10495732 | ORF_ID:all2736; hypothetical protein. | ORF_ID:alr3690; hypothetical protein. | 0.675 |
all2736 | alr5340 | gene:10494769 | gene:10497402 | ORF_ID:all2736; hypothetical protein. | ORF_ID:alr5340; hypothetical protein. | 0.771 |
all2736 | asl2417 | gene:10494769 | gene:10494447 | ORF_ID:all2736; hypothetical protein. | ORF_ID:asl2417; hypothetical protein. | 0.574 |
all2776 | all0575 | gene:10494810 | gene:10492586 | ORF_ID:all2776; hypothetical protein. | ORF_ID:all0575; unknown protein. | 0.528 |
all2776 | all1363 | gene:10494810 | gene:10493378 | ORF_ID:all2776; hypothetical protein. | Peptidylprolyl isomerase; ORF_ID:all1363; hypothetical protein. | 0.571 |
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