STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr2943ORF_ID:alr2943; hypothetical protein. (167 aa)    
Predicted Functional Partners:
alr2944
ORF_ID:alr2944; hypothetical protein.
 
    0.932
all3310
ORF_ID:all3310; hypothetical protein.
  
     0.600
all3941
ORF_ID:all3941; unknown protein.
  
     0.586
alr3057
ORF_ID:alr3057; probable glycosyl transferase.
  
     0.569
asl2942
ORF_ID:asl2942; unknown protein.
       0.544
alr2945
Orotidine 5'-phosphate decarboxylase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP); In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.530
alr3189
Beta-carotene ketolase; ORF_ID:alr3189.
  
     0.513
alr2841
ORF_ID:alr2841; unknown protein.
  
     0.504
all3221
ORF_ID:all3221; hypothetical protein; Belongs to the orange carotenoid-binding protein family.
  
     0.497
alr2117
ORF_ID:alr2117; unknown protein.
  
     0.496
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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