STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr2948ORF_ID:alr2948; putative zinc-binding oxidoreductase. (335 aa)    
Predicted Functional Partners:
all1649
ORF_ID:all1649; similar to polyketide synthase.
 
 
 0.952
all2635
Polyketide synthase type I; ORF_ID:all2635.
 
 
 0.952
all1648
ORF_ID:all1648; similar to polyketide synthase.
 
 
 0.930
all2646
Polyketide synthase type I; ORF_ID:all2646.
 
 
 0.930
hglD
Heterocyst glycolipid synthase; ORF_ID:alr5354; hglD gene product; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 
 0.915
alr3343
3-oxoacyl-[acyl-carrier-protein] synthase beta chain; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.904
hglE
Heterocyst glycolipid synthase; ORF_ID:all1646; hglE gene product.
 
 
 0.879
hetM
Polyketide synthase; ORF_ID:alr5357; hetM gene product.
 
  
 0.853
hglE-2
Heterocyst glycolipid synthase; ORF_ID:alr5351.
    
 0.756
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
      
 0.743
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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