STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr3059ORF_ID:alr3059; similar to polysaccharide export protein. (727 aa)    
Predicted Functional Partners:
all4388
ORF_ID:all4388; hypothetical protein.
 
 
 0.966
alr5068
Protein-tyrosine-phosphatase; ORF_ID:alr5068; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.949
all0495
ORF_ID:all0495; unknown protein.
 
 
 0.947
alr2294
ORF_ID:alr2294; similar to polysaccharide export outer membrane protein.
  
 
 0.926
hoxF
Hydrogenase subunit; ORF_ID:alr0752; hoxF gene product.
     
 0.886
all2285
Glucosyltransferase; ORF_ID:all2285.
 
  
 0.860
all4160
Anti-sigma factor antagonist; ORF_ID:all4160; probable glycosyltransferase; Belongs to the anti-sigma-factor antagonist family.
 
  
 0.858
all4719
ORF_ID:all4719; similar to glucosyltransferase.
 
  
 0.843
alr3060
ORF_ID:alr3060; unknown protein.
  
  
 0.836
all4420
Glucosyltransferase; ORF_ID:all4420.
 
  
 0.834
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.