STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all3310ORF_ID:all3310; hypothetical protein. (698 aa)    
Predicted Functional Partners:
all2158
Ferrichrome-iron receptor; ORF_ID:all2158.
  
   
 0.783
all5036
ORF_ID:all5036; unknown protein.
 
 
 
 0.769
alr2154
Tetracenomycin C synthesis protein; ORF_ID:alr2154.
      
 0.729
alr2269
ORF_ID:alr2269; chloroplastic outer envelope membrane protein homolog.
  
   
 0.717
all3941
ORF_ID:all3941; unknown protein.
  
     0.692
alr0892
ORF_ID:alr0892; hypothetical protein.
  
     0.679
alr2458
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
      
 0.670
all2981
Penicillin-binding protein; ORF_ID:all2981.
      
 0.667
alr4579
Penicillin-binding protein; ORF_ID:alr4579.
      
 0.667
all4316
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
      
 0.660
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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