Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| all3536 | alr0540 | gene:10495577 | gene:10492551 | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | 0.519 |
| all3536 | alr3358 | gene:10495577 | gene:10495396 | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 3-hydroxyacid dehydrogenase; ORF_ID:alr3358. | 0.403 |
| all4257 | alr0540 | gene:10496306 | gene:10492551 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | 0.853 |
| all4257 | alr2678 | gene:10496306 | gene:10494709 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | ORF_ID:alr2678; probable acyl-CoA synthase. | 0.851 |
| all4257 | alr3358 | gene:10496306 | gene:10495396 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 3-hydroxyacid dehydrogenase; ORF_ID:alr3358. | 0.818 |
| all4257 | alr3672 | gene:10496306 | gene:10495714 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Aldehyde dehydrogenase; ORF_ID:alr3672; Belongs to the aldehyde dehydrogenase family. | 0.932 |
| all4257 | alr4455 | gene:10496306 | gene:10496504 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | 0.473 |
| alr0540 | all3536 | gene:10492551 | gene:10495577 | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.519 |
| alr0540 | all4257 | gene:10492551 | gene:10496306 | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.853 |
| alr0540 | alr2678 | gene:10492551 | gene:10494709 | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | ORF_ID:alr2678; probable acyl-CoA synthase. | 0.642 |
| alr0540 | alr3358 | gene:10492551 | gene:10495396 | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | 3-hydroxyacid dehydrogenase; ORF_ID:alr3358. | 0.402 |
| alr0540 | alr3672 | gene:10492551 | gene:10495714 | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase; ORF_ID:alr3672; Belongs to the aldehyde dehydrogenase family. | 0.883 |
| alr0540 | alr4455 | gene:10492551 | gene:10496504 | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | 0.417 |
| alr2678 | all4257 | gene:10494709 | gene:10496306 | ORF_ID:alr2678; probable acyl-CoA synthase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.851 |
| alr2678 | alr0540 | gene:10494709 | gene:10492551 | ORF_ID:alr2678; probable acyl-CoA synthase. | 1-pyrroline-5 carboxylate dehydrogenase; ORF_ID:alr0540; Belongs to the aldehyde dehydrogenase family. | 0.642 |
| alr2678 | alr2948 | gene:10494709 | gene:10494984 | ORF_ID:alr2678; probable acyl-CoA synthase. | ORF_ID:alr2948; putative zinc-binding oxidoreductase. | 0.471 |
| alr2678 | alr3358 | gene:10494709 | gene:10495396 | ORF_ID:alr2678; probable acyl-CoA synthase. | 3-hydroxyacid dehydrogenase; ORF_ID:alr3358. | 0.529 |
| alr2678 | alr3672 | gene:10494709 | gene:10495714 | ORF_ID:alr2678; probable acyl-CoA synthase. | Aldehyde dehydrogenase; ORF_ID:alr3672; Belongs to the aldehyde dehydrogenase family. | 0.564 |
| alr2678 | alr4455 | gene:10494709 | gene:10496504 | ORF_ID:alr2678; probable acyl-CoA synthase. | Alr4455 protein; 6-oxocamphor hydrolase; ORF_ID:alr4455. | 0.987 |
| alr2948 | alr2678 | gene:10494984 | gene:10494709 | ORF_ID:alr2948; putative zinc-binding oxidoreductase. | ORF_ID:alr2678; probable acyl-CoA synthase. | 0.471 |
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