STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnHGlutamine-binding protein of glutamine ABC transporter; ORF_ID:alr3429; glnH gene product; Belongs to the bacterial solute-binding protein 3 family. (271 aa)    
Predicted Functional Partners:
alr4167
ATP-binding protein of amino acid ABC transporter; ORF_ID:alr4167.
 
 
 0.909
alr2536
Permease protein of branched-chain amino acid ABC transporter; ORF_ID:alr2536; Belongs to the binding-protein-dependent transport system permease family.
  
   
 0.903
all0342
Proton/sodium-glutamate symport protein; ORF_ID:all0342; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.899
alr1538
ORF_ID:alr1538; hypothetical protein.
  
   
 0.896
alr4166
Permease protein of amino acid ABC transporter; ORF_ID:alr4166.
 
 
 0.888
all1189
ORF_ID:all1189; hypothetical protein.
      
 0.881
all3551
ORF_ID:all3551; hypothetical protein.
      
 0.881
alr4165
Permease protein of amino acid ABC transporter; ORF_ID:alr4165.
 
  
 0.855
rpl20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
       0.772
alr1519
Amino acid transporter; ORF_ID:alr1519.
      
 0.755
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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