STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr3646Transcriptional regulator; ORF_ID:alr3646. (200 aa)    
Predicted Functional Partners:
alr3647
ORF_ID:alr3647; heterocyst specific ABC-transporter, membrane fusion protein DevB homolog.
 
   
 0.717
alr3648
ORF_ID:alr3648; heterocyst specific ABC-transporter, membrane spanning subunit DevC homolog.
       0.527
alr1941
Transcriptional regulator; ORF_ID:alr1941.
  
     0.476
all4972
ORF_ID:all4972; hypothetical protein.
  
   
 0.450
alr3649
ORF_ID:alr3649; heterocyst specific ABC-transporter, ATP-binding subunit DevA homolog.
   
   0.422
alr2679
Polyketide synthase; ORF_ID:alr2679.
   
 
 0.412
alr0810
Transcriptional regulator; ORF_ID:alr0810.
  
     0.408
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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