STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr3919ORF_ID:alr3919; hypothetical protein. (303 aa)    
Predicted Functional Partners:
all3918
Thiosulfate sulfurtransferase; ORF_ID:all3918.
       0.551
all4666
ORF_ID:all4666; hypothetical protein.
  
     0.530
asl4547
ORF_ID:asl4547; hypothetical protein; Belongs to the UPF0367 family.
  
     0.515
all4292
ORF_ID:all4292; hypothetical protein.
  
     0.489
asr4076
ORF_ID:asr4076; hypothetical protein.
  
     0.484
all1980
ORF_ID:all1980; unknown protein.
  
     0.472
asr0062
ORF_ID:asr0062; hypothetical protein.
  
     0.459
alr4373
ORF_ID:alr4373; hypothetical protein.
  
     0.448
alr3399
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
     0.443
asr4648
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.441
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.