STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr4046ORF_ID:alr4046; hypothetical protein. (335 aa)    
Predicted Functional Partners:
alr1063
ORF_ID:alr1063; hypothetical protein; Belongs to the pirin family.
     
 0.922
all1172
ORF_ID:all1172; hypothetical protein; Belongs to the pirin family.
     
 0.922
alr2106
ORF_ID:alr2106; hypothetical protein.
      
 0.920
alr2599
ORF_ID:alr2599; hypothetical protein.
      
 0.920
alr2326
ORF_ID:alr2326; hypothetical protein.
      
 0.916
all4276
Probable transcriptional regulatory protein all4276; ORF_ID:all4276; hypothetical protein.
      
 0.916
acpD
Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
    
 0.908
alr4045
ORF_ID:alr4045; hypothetical protein.
       0.752
hrcA
Heat-inducible transcriptional repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
       0.721
alr0577
FKBP-type peptidyl-prolyl cis-trans isomerase; ORF_ID:alr0577.
      0.662
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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