Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all1649 | all2635 | gene:10493666 | gene:10494666 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase type I; ORF_ID:all2635. | 0.804 |
all1649 | alr2679 | gene:10493666 | gene:10494710 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr2679. | 0.985 |
all1649 | alr2680 | gene:10493666 | gene:10494711 | ORF_ID:all1649; similar to polyketide synthase. | Polyketide synthase; ORF_ID:alr2680. | 0.976 |
all1649 | alr4058 | gene:10493666 | gene:10496101 | ORF_ID:all1649; similar to polyketide synthase. | ORF_ID:alr4058; similar to isovaleryl-CoA dehydrogenase. | 0.623 |
all1649 | alr4060 | gene:10493666 | gene:10496103 | ORF_ID:all1649; similar to polyketide synthase. | ORF_ID:alr4060; probable alginate O-acetylation protein; Belongs to the membrane-bound acyltransferase family. | 0.648 |
all1649 | alr4062 | gene:10493666 | gene:10496105 | ORF_ID:all1649; similar to polyketide synthase. | ORF_ID:alr4062; hypothetical protein. | 0.559 |
all2635 | all1649 | gene:10494666 | gene:10493666 | Polyketide synthase type I; ORF_ID:all2635. | ORF_ID:all1649; similar to polyketide synthase. | 0.804 |
all2635 | alr2679 | gene:10494666 | gene:10494710 | Polyketide synthase type I; ORF_ID:all2635. | Polyketide synthase; ORF_ID:alr2679. | 0.985 |
all2635 | alr2680 | gene:10494666 | gene:10494711 | Polyketide synthase type I; ORF_ID:all2635. | Polyketide synthase; ORF_ID:alr2680. | 0.977 |
all2635 | alr4058 | gene:10494666 | gene:10496101 | Polyketide synthase type I; ORF_ID:all2635. | ORF_ID:alr4058; similar to isovaleryl-CoA dehydrogenase. | 0.623 |
all2635 | alr4060 | gene:10494666 | gene:10496103 | Polyketide synthase type I; ORF_ID:all2635. | ORF_ID:alr4060; probable alginate O-acetylation protein; Belongs to the membrane-bound acyltransferase family. | 0.648 |
all2635 | alr4062 | gene:10494666 | gene:10496105 | Polyketide synthase type I; ORF_ID:all2635. | ORF_ID:alr4062; hypothetical protein. | 0.559 |
all3805 | alr2679 | gene:10495847 | gene:10494710 | ORF_ID:all3805; similar to dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Polyketide synthase; ORF_ID:alr2679. | 0.561 |
all3805 | alr2680 | gene:10495847 | gene:10494711 | ORF_ID:all3805; similar to dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Polyketide synthase; ORF_ID:alr2680. | 0.445 |
all3805 | alr4058 | gene:10495847 | gene:10496101 | ORF_ID:all3805; similar to dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | ORF_ID:alr4058; similar to isovaleryl-CoA dehydrogenase. | 0.481 |
all3805 | alr4062 | gene:10495847 | gene:10496105 | ORF_ID:all3805; similar to dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | ORF_ID:alr4062; hypothetical protein. | 0.567 |
all4127 | all4440 | gene:10496175 | gene:10496489 | ORF_ID:all4127; unknown protein. | ORF_ID:all4440; unknown protein. | 0.460 |
all4127 | all5120 | gene:10496175 | gene:10497179 | ORF_ID:all4127; unknown protein. | ORF_ID:all5120; unknown protein. | 0.643 |
all4127 | alr4058 | gene:10496175 | gene:10496101 | ORF_ID:all4127; unknown protein. | ORF_ID:alr4058; similar to isovaleryl-CoA dehydrogenase. | 0.715 |
all4127 | alr4062 | gene:10496175 | gene:10496105 | ORF_ID:all4127; unknown protein. | ORF_ID:alr4062; hypothetical protein. | 0.737 |
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