Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0134 | all2905 | gene:10492139 | gene:10494940 | ORF_ID:all0134; hypothetical protein. | ORF_ID:all2905; hypothetical protein. | 0.487 |
all0134 | asr4133 | gene:10492139 | gene:10496181 | ORF_ID:all0134; hypothetical protein. | ORF_ID:asr4133; hypothetical protein. | 0.521 |
all2399 | alr2809 | gene:10494429 | gene:10494843 | ORF_ID:all2399; hypothetical protein. | ORF_ID:alr2809; hypothetical protein. | 0.681 |
all2399 | alr4134 | gene:10494429 | gene:10496182 | ORF_ID:all2399; hypothetical protein. | ORF_ID:alr4134; hypothetical protein. | 0.551 |
all2399 | asr4133 | gene:10494429 | gene:10496181 | ORF_ID:all2399; hypothetical protein. | ORF_ID:asr4133; hypothetical protein. | 0.502 |
all2905 | all0134 | gene:10494940 | gene:10492139 | ORF_ID:all2905; hypothetical protein. | ORF_ID:all0134; hypothetical protein. | 0.487 |
all2905 | all5060 | gene:10494940 | gene:10497118 | ORF_ID:all2905; hypothetical protein. | ORF_ID:all5060; hypothetical protein. | 0.442 |
all2905 | alr2809 | gene:10494940 | gene:10494843 | ORF_ID:all2905; hypothetical protein. | ORF_ID:alr2809; hypothetical protein. | 0.754 |
all2905 | alr4134 | gene:10494940 | gene:10496182 | ORF_ID:all2905; hypothetical protein. | ORF_ID:alr4134; hypothetical protein. | 0.405 |
all2905 | asr4133 | gene:10494940 | gene:10496181 | ORF_ID:all2905; hypothetical protein. | ORF_ID:asr4133; hypothetical protein. | 0.501 |
all4679 | alr2809 | gene:10496732 | gene:10494843 | ORF_ID:all4679; hypothetical protein. | ORF_ID:alr2809; hypothetical protein. | 0.668 |
all4679 | alr4134 | gene:10496732 | gene:10496182 | ORF_ID:all4679; hypothetical protein. | ORF_ID:alr4134; hypothetical protein. | 0.570 |
all4679 | asr4133 | gene:10496732 | gene:10496181 | ORF_ID:all4679; hypothetical protein. | ORF_ID:asr4133; hypothetical protein. | 0.526 |
all4940 | asr4133 | gene:10496995 | gene:10496181 | ORF_ID:all4940; hypothetical protein. | ORF_ID:asr4133; hypothetical protein. | 0.490 |
all5060 | all2905 | gene:10497118 | gene:10494940 | ORF_ID:all5060; hypothetical protein. | ORF_ID:all2905; hypothetical protein. | 0.442 |
all5060 | alr2809 | gene:10497118 | gene:10494843 | ORF_ID:all5060; hypothetical protein. | ORF_ID:alr2809; hypothetical protein. | 0.410 |
all5060 | asr4133 | gene:10497118 | gene:10496181 | ORF_ID:all5060; hypothetical protein. | ORF_ID:asr4133; hypothetical protein. | 0.478 |
alr2809 | all2399 | gene:10494843 | gene:10494429 | ORF_ID:alr2809; hypothetical protein. | ORF_ID:all2399; hypothetical protein. | 0.681 |
alr2809 | all2905 | gene:10494843 | gene:10494940 | ORF_ID:alr2809; hypothetical protein. | ORF_ID:all2905; hypothetical protein. | 0.754 |
alr2809 | all4679 | gene:10494843 | gene:10496732 | ORF_ID:alr2809; hypothetical protein. | ORF_ID:all4679; hypothetical protein. | 0.668 |
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