Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
all0207 | all1051 | gene:10492214 | gene:10493065 | ORF_ID:all0207; hypothetical protein. | Glycerophosphoryl diester phosphodiesterase; ORF_ID:all1051. | 0.871 |
all0207 | all2843 | gene:10492214 | gene:10494877 | ORF_ID:all0207; hypothetical protein. | Alkaline phosphatase; ORF_ID:all2843. | 0.615 |
all0207 | alr0132 | gene:10492214 | gene:10492137 | ORF_ID:all0207; hypothetical protein. | ORF_ID:alr0132; hypothetical protein. | 0.449 |
all0207 | alr2190 | gene:10492214 | gene:10494219 | ORF_ID:all0207; hypothetical protein. | Alpha-amylase; ORF_ID:alr2190. | 0.455 |
all0207 | alr4238 | gene:10492214 | gene:10496287 | ORF_ID:all0207; hypothetical protein. | ORF_ID:alr4238; similar to phytase. | 0.575 |
all0207 | alr4794 | gene:10492214 | gene:10496847 | ORF_ID:all0207; hypothetical protein. | ORF_ID:alr4794; hypothetical protein. | 0.401 |
all0207 | alr4976 | gene:10492214 | gene:10497031 | ORF_ID:all0207; hypothetical protein. | Phosphodiesterase/alkaline phosphatase D; ORF_ID:alr4976. | 0.938 |
all0207 | alr5291 | gene:10492214 | gene:10497351 | ORF_ID:all0207; hypothetical protein. | ORF_ID:alr5291; similar to alkaline phosphatase. | 0.480 |
all1051 | all0207 | gene:10493065 | gene:10492214 | Glycerophosphoryl diester phosphodiesterase; ORF_ID:all1051. | ORF_ID:all0207; hypothetical protein. | 0.871 |
all1051 | all2843 | gene:10493065 | gene:10494877 | Glycerophosphoryl diester phosphodiesterase; ORF_ID:all1051. | Alkaline phosphatase; ORF_ID:all2843. | 0.412 |
all1051 | alr4238 | gene:10493065 | gene:10496287 | Glycerophosphoryl diester phosphodiesterase; ORF_ID:all1051. | ORF_ID:alr4238; similar to phytase. | 0.935 |
all1051 | alr4794 | gene:10493065 | gene:10496847 | Glycerophosphoryl diester phosphodiesterase; ORF_ID:all1051. | ORF_ID:alr4794; hypothetical protein. | 0.467 |
all1051 | alr4976 | gene:10493065 | gene:10497031 | Glycerophosphoryl diester phosphodiesterase; ORF_ID:all1051. | Phosphodiesterase/alkaline phosphatase D; ORF_ID:alr4976. | 0.671 |
all2425 | alr4238 | gene:10494455 | gene:10496287 | ORF_ID:all2425; unknown protein. | ORF_ID:alr4238; similar to phytase. | 0.556 |
all2843 | all0207 | gene:10494877 | gene:10492214 | Alkaline phosphatase; ORF_ID:all2843. | ORF_ID:all0207; hypothetical protein. | 0.615 |
all2843 | all1051 | gene:10494877 | gene:10493065 | Alkaline phosphatase; ORF_ID:all2843. | Glycerophosphoryl diester phosphodiesterase; ORF_ID:all1051. | 0.412 |
all2843 | alr0132 | gene:10494877 | gene:10492137 | Alkaline phosphatase; ORF_ID:all2843. | ORF_ID:alr0132; hypothetical protein. | 0.476 |
all2843 | alr0996 | gene:10494877 | gene:10493010 | Alkaline phosphatase; ORF_ID:all2843. | Protease; ORF_ID:alr0996; Belongs to the peptidase S8 family. | 0.472 |
all2843 | alr2190 | gene:10494877 | gene:10494219 | Alkaline phosphatase; ORF_ID:all2843. | Alpha-amylase; ORF_ID:alr2190. | 0.491 |
all2843 | alr4238 | gene:10494877 | gene:10496287 | Alkaline phosphatase; ORF_ID:all2843. | ORF_ID:alr4238; similar to phytase. | 0.681 |
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