STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hlpAHlpA protein; ORF_ID:all4429; similar to hemolytic protein HlpA. (308 aa)    
Predicted Functional Partners:
alr0558
ORF_ID:alr0558; probable glycosyltransferase.
      0.856
all4426
ORF_ID:all4426; probable glucosyltransferase.
    0.850
all4430
ORF_ID:all4430; probable polysaccharide biosynthesis protein.
 
  
 0.814
all4428
ORF_ID:all4428; hypothetical protein.
 
  
 0.736
asl0597
ORF_ID:asl0597; hypothetical protein.
  
     0.637
asr3935
DNA binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. It is essential for heterocyst differentiation; Belongs to the bacterial histone-like protein family.
   
  
 0.604
all4427
ORF_ID:all4427; similar to phytanoyl-CoA hydroxylase.
       0.598
all3047
ORF_ID:all3047; unknown protein.
      0.583
all4424
ORF_ID:all4424; probable glucosyltransferase.
 
     0.531
all0457
Uncharacterized low temperature-induced protein all0457; ORF_ID:all0457; hypothetical protein.
  
   
 0.520
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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