STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
all4998N-acetylmuramoyl-L-alanine amidase-related protein; ORF_ID:all4998. (227 aa)    
Predicted Functional Partners:
all1776
ORF_ID:all1776; hypothetical protein.
 
      0.815
all4999
N-acetylmuramoyl-L-alanine amidase; ORF_ID:all4999.
 
    
0.763
all1140
ORF_ID:all1140; similar to N-acetylmuramoyl-L-alanine amidase.
  
     0.627
alr1158
Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.557
alr5000
CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.548
alr4808
CinA-like protein; ORF_ID:alr4808; competence-damage inducible protein CinA homolog; Belongs to the CinA family.
 
     0.534
alr3539
ORF_ID:alr3539; unknown protein.
    
   0.487
all4545
ORF_ID:all4545; hypothetical protein.
 
     0.478
alr3444
ORF_ID:alr3444; hypothetical protein.
  
     0.451
minD-3
Septum site-determining protein; ORF_ID:alr3456; minD gene product.
  
     0.449
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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