Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| all5292 | all5339 | gene:10497352 | gene:10497401 | Putative phycocyanobilin lyase CpcS 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure. | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | 0.957 |
| all5292 | cpcB | gene:10497352 | gene:10492539 | Putative phycocyanobilin lyase CpcS 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure. | Phycocyanin beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.715 |
| all5292 | cpcC | gene:10497352 | gene:10492541 | Putative phycocyanobilin lyase CpcS 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure. | Phycocyanin-associated rod linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | 0.453 |
| all5292 | pecA | gene:10497352 | gene:10492535 | Putative phycocyanobilin lyase CpcS 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure. | Phycoerythrocyanin alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.431 |
| all5292 | pecB | gene:10497352 | gene:10492534 | Putative phycocyanobilin lyase CpcS 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure. | Phycoerythrocyanin beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.835 |
| all5292 | pecE | gene:10497352 | gene:10492537 | Putative phycocyanobilin lyase CpcS 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure. | Bilin biosynthesis protein; An enzyme involved in the biosynthesis of bilin. | 0.769 |
| all5339 | all5292 | gene:10497401 | gene:10497352 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Putative phycocyanobilin lyase CpcS 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure. | 0.957 |
| all5339 | alr0617 | gene:10497401 | gene:10492628 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Phycocyanobilin lyase CpcS 1; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-82' in CpcB and 'Cys-83' in PecB. Also able to add PCB to ApcA1, ApcA2, ApcB, ApcD and ApcF, but not PecA. In vitro can be made to add phycoerythrobilin, a non-physiological substrate, to its target proteins (using genes from Fremyella diplosiphon PCC 7601). Binds PCB extremely rapidly, followed by a much slower phase of PCB transfer to the apo-acceptor protein. This suggests that the lyase has a chaperone- like function, and may serve to regulate the manner (possibly the conformation [...] | 0.986 |
| all5339 | apcB | gene:10497401 | gene:10492026 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Allophycocyanin beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 to 653 nanometers. | 0.824 |
| all5339 | cpcB | gene:10497401 | gene:10492539 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Phycocyanin beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.906 |
| all5339 | cpcC | gene:10497401 | gene:10492541 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Phycocyanin-associated rod linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | 0.821 |
| all5339 | cpcE | gene:10497401 | gene:10492543 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Phycocyanobilin lyase alpha subunit; Required for the chromophorylation of the CpcA gene product. Belongs to the CpcE/RpcE/PecE family. | 0.934 |
| all5339 | cpcF | gene:10497401 | gene:10492544 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Phycocyanobilin lyase beta subunit; Required for the chromophorylation of the CpcA gene product. Belongs to the CpcE/RpcE/PecE family. | 0.867 |
| all5339 | pecA | gene:10497401 | gene:10492535 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Phycoerythrocyanin alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.815 |
| all5339 | pecB | gene:10497401 | gene:10492534 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Phycoerythrocyanin beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.943 |
| all5339 | pecE | gene:10497401 | gene:10492537 | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | Bilin biosynthesis protein; An enzyme involved in the biosynthesis of bilin. | 0.924 |
| alr0617 | all5339 | gene:10492628 | gene:10497401 | Phycocyanobilin lyase CpcS 1; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-82' in CpcB and 'Cys-83' in PecB. Also able to add PCB to ApcA1, ApcA2, ApcB, ApcD and ApcF, but not PecA. In vitro can be made to add phycoerythrobilin, a non-physiological substrate, to its target proteins (using genes from Fremyella diplosiphon PCC 7601). Binds PCB extremely rapidly, followed by a much slower phase of PCB transfer to the apo-acceptor protein. This suggests that the lyase has a chaperone- like function, and may serve to regulate the manner (possibly the conformation [...] | Phycocyanobilin lyase CpcT; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-154' of C-phycocyanin subunit beta (CpcB) and to 'Cys- 153' of phycoerythrocyanin subunit beta (PecB). Does not have chromophore lyase activity for ApcA1, ApcA2, ApcB, ApcD, ApcF or PecA. Belongs to the CpcT/CpeT biliprotein lyase family. | 0.986 |
| alr0617 | apcB | gene:10492628 | gene:10492026 | Phycocyanobilin lyase CpcS 1; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-82' in CpcB and 'Cys-83' in PecB. Also able to add PCB to ApcA1, ApcA2, ApcB, ApcD and ApcF, but not PecA. In vitro can be made to add phycoerythrobilin, a non-physiological substrate, to its target proteins (using genes from Fremyella diplosiphon PCC 7601). Binds PCB extremely rapidly, followed by a much slower phase of PCB transfer to the apo-acceptor protein. This suggests that the lyase has a chaperone- like function, and may serve to regulate the manner (possibly the conformation [...] | Allophycocyanin beta subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 to 653 nanometers. | 0.825 |
| alr0617 | cpcB | gene:10492628 | gene:10492539 | Phycocyanobilin lyase CpcS 1; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-82' in CpcB and 'Cys-83' in PecB. Also able to add PCB to ApcA1, ApcA2, ApcB, ApcD and ApcF, but not PecA. In vitro can be made to add phycoerythrobilin, a non-physiological substrate, to its target proteins (using genes from Fremyella diplosiphon PCC 7601). Binds PCB extremely rapidly, followed by a much slower phase of PCB transfer to the apo-acceptor protein. This suggests that the lyase has a chaperone- like function, and may serve to regulate the manner (possibly the conformation [...] | Phycocyanin beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.938 |
| alr0617 | cpcC | gene:10492628 | gene:10492541 | Phycocyanobilin lyase CpcS 1; Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-82' in CpcB and 'Cys-83' in PecB. Also able to add PCB to ApcA1, ApcA2, ApcB, ApcD and ApcF, but not PecA. In vitro can be made to add phycoerythrobilin, a non-physiological substrate, to its target proteins (using genes from Fremyella diplosiphon PCC 7601). Binds PCB extremely rapidly, followed by a much slower phase of PCB transfer to the apo-acceptor protein. This suggests that the lyase has a chaperone- like function, and may serve to regulate the manner (possibly the conformation [...] | Phycocyanin-associated rod linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | 0.823 |
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