Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
POPDC3Popeye domain-containing protein 3. (299 aa)    
Predicted Functional Partners:
KCNK2
Potassium channel subfamily K member 2 isoform X1.
     
 0.955
BVES
Blood vessel epicardial substance isoform X1.
  
 
0.917
POPDC2
Popeye domain-containing protein 2 isoform X1.
  
  
 
0.902
TMEM161A
Transmembrane protein 161A.
      
 0.650
TMEM70
Transmembrane protein 70, mitochondrial.
      
 0.629
RHBDD1
Rhomboid-related protein 4 isoform X1.
    
 
 0.624
TBCCD1
TBCC domain-containing protein 1.
      
 0.611
GINS1
DNA replication complex GINS protein PSF1.
      
 0.589
TMEM214
Transmembrane protein 214.
      
 0.588
ICMT
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.573
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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