STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNU13U4/U6 small nuclear ribonucleoprotein SNU13. (173 aa)    
Predicted Functional Partners:
NOP58
Nucleolar protein 58 isoform X1.
   
 0.999
NOP56
Nucleolar protein 56.
   
 0.999
BMS1
Ribosome biogenesis protein BMS1 homolog.
   
 0.999
FBL
RRNA 2'-O-methyltransferase fibrillarin.
   
 0.999
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10.
   
 0.999
RRP9
U3 small nucleolar RNA-interacting protein 2 isoform X1.
   
 0.999
PRPF31
U4/U6 small nuclear ribonucleoprotein PRP31.
    
 0.999
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.999
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.999
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.999
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.