STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB3Calcium and integrin-binding family member 3 isoform X1. (188 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel like 1.
    
 0.793
TMC3
Transmembrane channel like 3.
    
 0.793
TMC2
Transmembrane channel-like protein 2 isoform X1.
    
 0.762
NIN
Ninein.
    
 0.730
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2 isoform X1.
   
 
 0.727
NEDD9
Enhancer of filamentation 1 isoform X1.
   
 0.685
TRIP13
Pachytene checkpoint protein 2 homolog isoform X1.
    
 
 0.680
SPICE1
Spindle and centriole-associated protein 1 isoform X1.
      
 0.670
LUM
Lumican.
    
 0.650
PTPRG
Receptor-type tyrosine-protein phosphatase gamma isoform X1.
      
 0.649
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.