STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRLSarcalumenin isoform X1. (956 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn-5.
    
 0.658
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
  
 0.607
HSPB3
Heat shock protein beta-3.
   
   0.598
EIF3L
Eukaryotic translation initiation factor 3 subunit L isoform X1.
    
 
 0.558
ATP2A2
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2.
   
  
 0.491
ATP2A1
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1.
   
  
 0.491
LOC110089239
Sarcoplasmic/endoplasmic reticulum calcium ATPase 3.
   
  
 0.433
ENSPVIP00000029516
Sarcoplasmic/endoplasmic reticulum calcium ATPase 3-like.
   
  
 0.433
ATP2C1
Calcium-transporting ATPase type 2C member 1 isoform X1.
   
  
 0.413
ATP2C2
Calcium-transporting ATPase type 2C member 2.
   
  
 0.413
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.