STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF638Zinc finger protein 638 isoform X1. (2292 aa)    
Predicted Functional Partners:
NIPBL
Cohesin loading factor subunit SCC2.
   
 0.711
U2SURP
U2 snRNP-associated SURP motif-containing protein isoform X1.
   
    0.684
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.622
SENP6
Sentrin-specific protease 6 isoform X1.
   
   0.618
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 0.530
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
    0.512
ENSPVIP00000015452
annotation not available
   
 0.511
ZFC3H1
Zinc finger C3H1 domain-containing protein isoform X1.
   
   0.507
YTHDC1
YTH domain-containing protein 1 isoform X1.
   
 
 0.502
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
    
 0.502
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.