STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF638Zinc finger protein 638 isoform X1. (2292 aa)    
Predicted Functional Partners:
NIPBL
Cohesin loading factor subunit SCC2.
   
  0.863
U2SURP
U2 snRNP-associated SURP motif-containing protein isoform X1.
   
    0.757
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
   0.751
SENP6
Sentrin-specific protease 6 isoform X1.
   
   0.745
ZNF395
Zinc finger protein 395.
    
 0.634
NTAN1
N-terminal asparagine amidase.
      
 0.622
TMEM82
Transmembrane protein 82.
      
 0.622
ZFC3H1
Zinc finger C3H1 domain-containing protein isoform X1.
   
   0.570
RNF123
Ring finger protein 123.
      
 0.568
SH3BP4
SH3 domain-binding protein 4.
      
 0.567
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.