STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD5PiggyBac transposable element-derived protein 5. (501 aa)    
Predicted Functional Partners:
LOC110077694
[histone H3]-lysine36 N-dimethyltransferase SETMAR.
    
 
 0.699
FAM83C
Protein FAM83C.
      
 0.695
CD3E
T-cell surface glycoprotein CD3 epsilon chain isoform X1.
   
 0.695
TMEM145
Transmembrane protein 145.
   
  
 0.674
RBM33
RNA-binding protein 33 isoform X1.
    
 
 0.657
HARBI1
Putative nuclease HARBI1.
      
 0.657
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
   0.654
FIBIN
Fin bud initiation factor homolog.
      
 0.626
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.625
KATNA1
Katanin catalytic subunit A1.
    
 0.612
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.