STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF6TATA-box binding protein associated factor 6. (702 aa)    
Predicted Functional Partners:
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.999
TAF2
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.999
TAF10
TATA-box binding protein associated factor 10.
    
 0.999
ENSPVIP00000012999
annotation not available
    
 0.998
TAF8
Transcription initiation factor TFIID subunit 8 isoform X1.
    
 0.998
TAF4
Transcription initiation factor TFIID subunit 4.
    
 0.997
TAF3
Transcription initiation factor TFIID subunit 3.
    
 0.997
TAF9
TATA-box binding protein associated factor 9.
    
 0.996
TAF7
Transcription initiation factor TFIID subunit 7-like isoform X1.
    
 0.991
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.990
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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