STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPA3Heterogeneous nuclear ribonucleoprotein A1/A3. (376 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.977
RBMX
RNA-binding motif protein, X chromosome isoform X1.
  
0.941
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1 isoform X1.
  
  
 
0.902
LEO1
RNA polymerase-associated protein LEO1.
    
 0.753
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
  
 0.709
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.683
SRSF2
Splicing factor, arginine/serine-rich 2.
  
0.681
PJVK
Pejvakin.
      
 0.679
OSBPL6
Oxysterol-binding protein-related protein 6 isoform X1.
      
 0.679
GSDME
Non-syndromic hearing impairment protein 5.
      
 0.679
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.