Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPM6AGlycoprotein M6A. (319 aa)    
Predicted Functional Partners:
MAPT
Microtubule-associated protein tau-like isoform X1.
   
 
 0.825
UPK1B
Uroplakin-1b.
   
  
 0.713
MBP
Myelin basic protein.
   
 
 0.695
TSPAN7
Tetraspanin-7.
   
  
 0.647
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4.
      
 0.644
CLCN3
H(+)/Cl(-) exchange transporter 3 isoform X1.
      
 0.627
MAP2
Microtubule-associated protein 2 isoform X1.
   
 
 0.608
FITM2
Fat storage-inducing transmembrane protein 2.
    
   0.571
ARMC1
Armadillo repeat-containing protein 1.
    
   0.549
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 
 0.542
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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