STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH1Alkylated DNA repair protein alkB homolog 1. (339 aa)    
Predicted Functional Partners:
FTO
Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.
     
 0.776
TASOR
Protein TASOR isoform X1.
   
  
 0.681
SUV39H1
Histone-lysine N-methyltransferase SUV39H1 isoform X1.
      
 0.679
YTHDC1
YTH domain-containing protein 1 isoform X1.
      
 0.679
SIN3A
Paired amphipathic helix protein Sin3a.
      
 0.679
ZCCHC8
Zinc finger CCHC domain-containing protein 8 isoform X1.
      
 0.679
PRMT5
Type II protein arginine methyltransferase.
      
 0.679
ALKBH2
DNA oxidative demethylase ALKBH2.
      
 0.679
ALKBH5
MRNA N6-methyladenine demethylase.
      
 0.665
PUS7
Pseudouridylate synthase 7 homolog isoform X1.
      
 0.641
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.