Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFI35Interferon-induced 35 kDa protein. (383 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.995
RPL23A
Large subunit ribosomal protein L23Ae.
  
 0.984
RPL5
Large subunit ribosomal protein L5e.
  
 0.983
RPL14
Large subunit ribosomal protein L14e.
   
 0.983
RPL38
Large subunit ribosomal protein L38e.
   
 0.983
NMI
N-myc-interactor isoform X1.
  
 
0.982
RPL26
Large subunit ribosomal protein L26e.
  
 0.982
RPL35A
Large subunit ribosomal protein L35Ae.
   
 0.982
RPL39
Large subunit ribosomal protein L39e.
   
 0.982
RPL29
Ribosomal protein L29.
   
 0.982
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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