Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RUNDC1RUN domain-containing protein 1. (557 aa)    
Predicted Functional Partners:
VPS51
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog.
   
  
 0.689
LRRC46
Leucine-rich repeat-containing protein 46 isoform X1.
      
 0.666
CCDC96
Coiled-coil domain-containing protein 96.
      
 0.625
CCDC186
Coiled-coil domain-containing protein 186 isoform X1.
      
 0.618
TMF1
TATA element modulatory factor.
      
 0.571
ICA1
Islet cell autoantigen 1.
    
 
 0.507
ICA1L
Islet cell autoantigen 1-like protein isoform X1.
    
 
 0.507
SGSM1
Small G protein signaling modulator 1 isoform X1.
    
 
 0.488
SGSM2
Small G protein signaling modulator 2 isoform X1.
    
 
 0.488
ELF3
ETS-related transcription factor Elf-3.
      
 0.482
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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