STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPGD15-hydroxyprostaglandin dehydrogenase [NAD(+)] isoform X1. (266 aa)    
Predicted Functional Partners:
PTGR1
Prostaglandin reductase 1.
   
 0.963
PTGES3
Cytosolic prostaglandin-E synthase.
     
 0.960
ZADH2
Prostaglandin reductase 3 isoform X1.
 
 
  0.952
PTGES
Microsomal prostaglandin-E synthase 1.
     
 0.947
PTGR2
Prostaglandin reductase 2.
   
 0.946
PTGES2
Microsomal prostaglandin-E synthase 2.
     
 0.925
PRXL2B
Prostamide/prostaglandin F2alpha synthase.
     
 0.921
LOC110076832
Carbonyl reductase [NADPH] 1-like.
     
 0.905
LOC110076821
Carbonyl reductase [NADPH] 1-like.
     
 0.905
FITM1
Fat storage-inducing transmembrane protein 1.
      
 0.789
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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