STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEDD-2Death effector domain-containing protein. (173 aa)    
Predicted Functional Partners:
CNOT10
CCR4-NOT transcription complex subunit 10 isoform X1.
   
  
 0.580
CNOT11
CCR4-NOT transcription complex subunit 11.
      
 0.567
CNOT7
CCR4-NOT transcription complex subunit 7.
      
 0.521
CNOT8
CCR4-NOT transcription complex subunit 7/8.
      
 0.507
PARN
Poly(A)-specific ribonuclease PARN isoform X1.
      
 0.461
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
  
 0.442
PNLDC1
Poly(A)-specific ribonuclease PNLDC1 isoform X1.
      
 0.437
CNOT2
CCR4-NOT transcription complex subunit 2 isoform X1.
      
 0.437
REXO2
Oligoribonuclease, mitochondrial.
      
 0.425
EAPP
E2F-associated phosphoprotein.
      
 0.409
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.