STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD9Homeobox protein HoxB/C/D9. (88 aa)    
Predicted Functional Partners:
HOXC9
Homeobox protein HoxB/C/D9.
   
   0.841
HOXD10
Homeobox protein Hox-D10 isoform X1.
   
  
 0.708
HOXA9
Homeobox protein Hox-A9.
   
   0.573
MEIS1
Homeobox protein Meis1 isoform X1.
    
 
 0.563
EVX1
Homeobox even-skipped homolog protein 1.
   
 
 0.500
HOXB7
Homeobox protein HoxA/B7.
   
 
 0.469
HOXC10
Homeobox protein Hox-C10.
   
 
 0.405
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.