STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFXL1NF-X1-type zinc finger protein NFXL1. (891 aa)    
Predicted Functional Partners:
CNGA1
Cyclic nucleotide gated channel alpha 1.
      
 0.870
DNAAF4
Dyslexia susceptibility 1 candidate gene 1 protein.
    
 
 0.697
OCIAD1
OCIA domain-containing protein 1.
      
 0.622
RPS19
Small subunit ribosomal protein S19e.
    
   0.588
DCUN1D4
DCN1-like protein 4 isoform X1.
      
 0.574
CMIP
C-Maf-inducing protein isoform X1.
      
 0.570
ZNF451
E3 SUMO-protein ligase ZNF451.
      
 0.564
LOC110090046
Large subunit ribosomal protein L17e.
    
   0.557
DENND11
Protein LCHN.
   
  
 0.540
EDC3
Enhancer of mRNA-decapping protein 3.
   
    0.534
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.