STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFXL1NF-X1-type zinc finger protein NFXL1. (891 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
   0.711
CNGA1
Cyclic nucleotide gated channel alpha 1.
      
 0.620
RPS12
Small subunit ribosomal protein S12e.
    
 
 0.591
LOC110083052
40S ribosomal protein S12-like.
    
 
 0.591
DNAAF4
Dyslexia susceptibility 1 candidate gene 1 protein.
   
 
 0.585
RPL23A
Large subunit ribosomal protein L23Ae.
    
 
 0.561
RPS19
Small subunit ribosomal protein S19e.
    
   0.560
RPS13
Small subunit ribosomal protein S13e.
    
   0.560
RPS15
Small subunit ribosomal protein S15e.
    
   0.560
RPL5
Large subunit ribosomal protein L5e.
    
   0.544
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.