STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD10Homeobox protein Hox-D10 isoform X1. (371 aa)    
Predicted Functional Partners:
HOXA9
Homeobox protein Hox-A9.
   
  
 0.918
HOXD9
Homeobox protein HoxB/C/D9.
   
  
 0.708
HOXA5
Homeobox protein HoxA/B/C5.
    
 
 0.626
EN2
Homeobox protein engrailed-2.
   
 
 0.598
HOXD13
Homeobox protein Hox-D13.
      
 0.559
WNT2B
Wingless-type MMTV integration site family, member 2.
     
 0.509
MKX
Homeobox protein Mohawk isoform X1.
    
 
 0.507
TBX20
T-box transcription factor TBX20.
    
 
 0.475
HOXD11
Homeobox D11.
   
  
 0.474
HOXC11
Homeobox protein HoxC/D11.
   
  
 0.474
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.