STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD12Homeobox D12. (290 aa)    
Predicted Functional Partners:
SALL1
Sal-like protein 1.
   
 
 0.684
TBX5
T-box transcription factor TBX5.
   
 
 0.522
HAND2
Heart- and neural crest derivatives-expressed protein 2.
    
 
 0.517
IDH2
Isocitrate dehydrogenase [NADP], mitochondrial.
      
 0.503
HOXD13
Homeobox protein Hox-D13.
      
 0.439
SALL3
Spalt like transcription factor 3.
   
 
 0.437
HOXA13
Homeobox protein HoxA/C/D13.
  
  
0.431
IRX2
Iroquois-class homeodomain protein IRX-2 isoform X1.
    
 
 0.422
IRX5
Iroquois homeobox 5.
    
 
 0.422
GLIS3
Zinc finger protein GLIS1/3.
      
 0.404
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.