STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A19Solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19. (324 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
   0.815
RPL14
Large subunit ribosomal protein L14e.
   
 
 0.773
RPL27
Large subunit ribosomal protein L27e.
   
 
 0.715
SMNDC1
Survival of motor neuron-related-splicing factor 30.
      
 0.620
SLC19A3
Solute carrier family 19 (thiamine transporter), member 2/3.
      
 0.617
ATP5PD
F-type H+-transporting ATPase subunit d.
   
  
 0.572
TIMM17B
Mitochondrial import inner membrane translocase subunit Tim17-B.
      
 0.563
MSTO1
Protein misato homolog 1.
   
  
 0.563
ENSPVIP00000028945
annotation not available
      
 0.562
TYRP1
Tyrosinase related protein 1.
      
 0.561
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.